Contents

schemaMeta

Association schema for pooled meta-analysis rows ("meta")

Column and artifact contract for pooled meta-analysis rows. The meta.keys are empty because the keys come from the source schema at pool time.

Usage

schemaMeta()

Value

A PolyGeniusSchema for the "meta" analysis type.

Columns

Column	Status	Type	Meaning
`schema`	required	character	Name of the schema the row follows.
`source.schema`	required	character	Schema the cell was pooled from.
`group.id`	required	character	Identifier of the pooled cell.
`estimate`	required	numeric	Point estimate, on the scale given by `effect.scale`.
`se`	required	numeric	Standard error of the estimate.
`lower`	required	numeric	Lower interval bound.
`upper`	required	numeric	Upper interval bound.
`statistic`	required	numeric	Test statistic.
`pval`	required	numeric	Raw p-value.
`adj.pval`	required	numeric	p-value adjusted within its declared adjustment family.
`adj.family.id`	required	integer	Key into `$indices$multiplicity`, the adjustment family `adj.pval` came from.
`n.studies`	required	integer	Number of studies pooled in the cell.
`pool.method`	required	character	Pooling estimator.
`model`	required	character	Mirror of `pool.method`.
`heterogeneity.q`	required	numeric	Heterogeneity Q statistic.
`heterogeneity.df`	required	integer	Degrees of freedom of the heterogeneity test.
`heterogeneity.pval`	required	numeric	p-value of the heterogeneity test.
`heterogeneity.adj.pval`	required	numeric	Adjusted p-value of the heterogeneity test.
`heterogeneity.adj.family.id`	required	integer	Key into `$indices$multiplicity` for the heterogeneity adjustment family.
`tau2`	required	numeric	Between-study variance.
`i2`	required	numeric	Share of variability due to heterogeneity.
`pi.lower`	required	numeric	Lower bound of the prediction interval.
`pi.upper`	required	numeric	Upper bound of the prediction interval.
`family`	optional	character	Fitted regression or comparison family.
`outcome`	optional	character	Outcome label.
`predictor`	optional	character	Predictor label.
`term`	optional	character	Coefficient term the row describes.
`term.type`	optional	character	Kind of coefficient term.
`stratum`	optional	character	Stratum the fit was run in.
`effect.scale`	optional	character	Scale of `estimate`, one of the controlled `effect.scale` vocabulary.
`test`	optional	character
`n`	optional	numeric	Sample size.
`n.cases`	optional	numeric	Number of cases.
`n.controls`	optional	numeric	Number of controls.
`n.events`	optional	numeric	Number of events.
`n.competing`	optional	numeric
`method`	optional	character
`exposure`	optional	character
`mediator`	optional	character
`effect`	optional	character
`effect.type`	optional	character
`chr`	optional	character
`position`	optional	integer
`a1.canonical`	optional	character
`a2.canonical`	optional	character
`eaf`	optional	numeric

Artifacts

Artifact	Status	Federation-safe	Meaning
`study.weights`	optional	yes	How much each input study contributed to each pooled cell.

Allowed plots: forest, landscape (default forest).

Meta-analysis

Not meta-eligible.