Which PRS Model Predicts Best

This is an evaluation question, not an association question.

  • use evaluate$compare() for predictive performance
  • use associate$compare() for association effects or model terms
cmp <- evaluate$compare(
  models = c(model_a, model_b),
  on = data,
  outcome = demented
)

What comes back

A PolyGeniusEvaluation object with delta-style performance metrics such as differences in AUC, RMSE, or C-index depending on outcome type.

Plotting

visualize$evaluate$compare$delta.forest(cmp)

Open the evaluation guide