Algorithm Rules
Concrete rules used by the supported model-generation algorithms.
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ClumpVariantsRule resolves one clumped.variants output by loading a GWAS resource and a matching reference panel, then running panel clumping.
Aliases:
ClumpVariantsRule
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Build bigsnpr LD storage rule
Aliases:
BuildLDBigsnprRule
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RunLdPred2Rule resolves one polygenius.model output for LDpred2.
Aliases:
RunLdPred2Rule
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RunLassosum2Rule resolves one polygenius.model output for lassosum2.
Aliases:
RunLassosum2Rule
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RunCojoRule resolves one polygenius.model output for COJO.
Aliases:
RunCojoRule
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Build PRS-CS LD block storage rule
Aliases:
BuildLDPrscsRule
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RunPrscsRule resolves one polygenius.model output for PRS-CS.
Aliases:
RunPrscsRule
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ThresholdClumpedRule resolves one polygenius.model output for algorithm ClumpingThresholding .
Aliases:
ThresholdClumpedRule
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