Guide

The guide keeps the package organized as a practical learning path: orient yourself, generate models, evaluate them, use them on cohort data, and then go deeper only when you need to.

Quick Orientation

• Why PolyGenius
• Minimal Mental Model

Model Generation and Evaluation

• First End-to-End Analysis
• GWAS Sources
• Algorithms
• Generation Patterns and Troubleshooting
• Evaluate Models

Using Models on Cohorts

• PolyGeniusData
• Compute in Depth
• Choosing an Association Analysis
  • Direct Regression Associations
  • Survival Associations
  • Stratification and Heterogeneity
  • Association Comparisons
  • Mediation
  • Mendelian Randomization
  • Meta-Analysis of Associations
• Visualization