Models
PRS model containers and sets.
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PolyGeniusModel is an R6 class for working with Polygenic Risk Score (PRS) models. It stores a tibble of variants alongside package- and user-defined metadata (e.g., GWAS metadata, generation logs, liftover logs).
Aliases:
PolyGeniusModel, PolyGeniusModel.class, readPolyGeniusModel, [.PolyGeniusModel, $.PolyGeniusModel, .DollarNames.PolyGeniusModel, filter.PolyGeniusModel, select.PolyGeniusModel, mutate.PolyGeniusModel, arrange.PolyGeniusModel, slice.PolyGeniusModel, rename.PolyGeniusModel, transmute.PolyGeniusModel, group_by.PolyGeniusModel, ungroup.PolyGeniusModel, summarise.PolyGeniusModel, nrow.PolyGeniusModel, ncol.PolyGeniusModel, dim.PolyGeniusModel, length.PolyGeniusModel, rownames.PolyGeniusModel, colnames.PolyGeniusModel, dimnames.PolyGeniusModel
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PolyGeniusModelSet is an R6 container for multiple PolyGeniusModel objects (and/or nested sets). It provides a small grammar to filter/select/mutate the per-model variants tables, filter models by model-level conditions, fetch overview data across models, and print a tidy overview.
Aliases:
PolyGeniusModelSet, PolyGeniusModelSet.class, c.PolyGeniusModel, c.PolyGeniusModelSet, length.PolyGeniusModelSet, names.PolyGeniusModelSet, names<-.PolyGeniusModelSet, [[.PolyGeniusModelSet, [.PolyGeniusModelSet
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