Whether PRS X Is Associated With Trait Y
Use associate$regression() for direct outcome association tests, supporting one or many outcomes, predictors, and adjusted covariates .
- Discrete/binary outcome: logistic regression (
glm) - Continuous outcome: linear regression (
lm)
assoc <- associate$regression(
data,
outcome = demented,
predictors = everything(),
covariates = c(age, sex, PCA)
)What comes back
A PolyGeniusAssociations object using the regression summary schema. See the full page for the exact lm and glm row fields and interpretation.
Plotting
visualize$associations$forest(assoc)
visualize$associations$heatmap(assoc)